|
|
@@ -0,0 +1,495 @@
|
|
|
+{
|
|
|
+ "variable_list": [
|
|
|
+ {
|
|
|
+ "name": "probe_in_tracker",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "femur_ref_in_tracker",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "femur_in_femur_ref",
|
|
|
+ "type": "transform_obj",
|
|
|
+ "value": [
|
|
|
+ 49.7073,
|
|
|
+ -72.6173,
|
|
|
+ -9.09289,
|
|
|
+ 0.440928,
|
|
|
+ 0.542853,
|
|
|
+ 0.490098,
|
|
|
+ 0.520286
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "tibia_ref_in_tracker",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "tibia_in_tibia_ref",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "camera_ref_in_tracker",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "left_camera_in_tracker",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "right_camera_in_tracker",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "femur_in_tracker",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "tibia_in_tracker",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_in_femur_ref",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_in_tibia_ref",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_in_femur",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_in_tibia",
|
|
|
+ "type": "transform_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_tip_in_femur_ref",
|
|
|
+ "type": "scalarxyz_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_tip_in_tibia_ref",
|
|
|
+ "type": "scalarxyz_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "picked_point_in_femur_ref",
|
|
|
+ "type": "scalarxyz_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "picked_point_in_tibia_ref",
|
|
|
+ "type": "scalarxyz_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "femur_in_femur_ref_error",
|
|
|
+ "type": "double_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "tibia_in_tibia_ref_error",
|
|
|
+ "type": "double_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_tip_in_femur",
|
|
|
+ "type": "scalarxyz_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_tip_in_tibia",
|
|
|
+ "type": "scalarxyz_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "picked_point_in_femur",
|
|
|
+ "type": "scalarxyz_obj"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "picked_point_in_tibia",
|
|
|
+ "type": "scalarxyz_obj"
|
|
|
+ }
|
|
|
+ ],
|
|
|
+ "object_list": [
|
|
|
+ {
|
|
|
+ "type": "transform_tree",
|
|
|
+ "name": "transform_tree",
|
|
|
+ "init_config": {
|
|
|
+ "node_list": [
|
|
|
+ {
|
|
|
+ "name": "tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe_ref",
|
|
|
+ "parent": "tracker",
|
|
|
+ "transform_var_name": "probe_in_tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "probe",
|
|
|
+ "parent": "probe_ref",
|
|
|
+ "transform": [
|
|
|
+ -0.23,
|
|
|
+ -13.98,
|
|
|
+ -119.65,
|
|
|
+ 1,
|
|
|
+ 0,
|
|
|
+ 0,
|
|
|
+ 0
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "femur_ref",
|
|
|
+ "parent": "tracker",
|
|
|
+ "transform_var_name": "femur_ref_in_tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "femur",
|
|
|
+ "parent": "femur_ref",
|
|
|
+ "transform_var_name": "femur_in_femur_ref"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "tibia_ref",
|
|
|
+ "parent": "tracker",
|
|
|
+ "transform_var_name": "tibia_ref_in_tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "tibia",
|
|
|
+ "parent": "tibia_ref",
|
|
|
+ "transform_var_name": "tibia_in_tibia_ref"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "camera_ref",
|
|
|
+ "parent": "tracker",
|
|
|
+ "transform_var_name": "camera_ref_in_tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "left_camera",
|
|
|
+ "parent": "camera_ref",
|
|
|
+ "transform": [
|
|
|
+ -11.3375,
|
|
|
+ 21.2730,
|
|
|
+ -37.5694,
|
|
|
+ 0.0009,
|
|
|
+ -0.7088,
|
|
|
+ -0.0091,
|
|
|
+ 0.7053
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "name": "right_camera",
|
|
|
+ "parent": "camera_ref",
|
|
|
+ "transform": [
|
|
|
+ -11.2100,
|
|
|
+ 22.1807,
|
|
|
+ -97.3032,
|
|
|
+ 0.0011,
|
|
|
+ 0.7066,
|
|
|
+ 0.0120,
|
|
|
+ -0.7075
|
|
|
+ ]
|
|
|
+ }
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ "start_config": {
|
|
|
+ "watch_list": [
|
|
|
+ {
|
|
|
+ "target": "left_camera",
|
|
|
+ "observer": "tracker",
|
|
|
+ "transform_var_name": "left_camera_in_tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "target": "right_camera",
|
|
|
+ "observer": "tracker",
|
|
|
+ "transform_var_name": "right_camera_in_tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "target": "femur",
|
|
|
+ "observer": "tracker",
|
|
|
+ "transform_var_name": "femur_in_tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "target": "tibia",
|
|
|
+ "observer": "tracker",
|
|
|
+ "transform_var_name": "tibia_in_tracker"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "target": "probe",
|
|
|
+ "observer": "femur_ref",
|
|
|
+ "transform_var_name": "probe_in_femur_ref"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "target": "probe",
|
|
|
+ "observer": "tibia_ref",
|
|
|
+ "transform_var_name": "probe_in_tibia_ref"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "target": "probe",
|
|
|
+ "observer": "femur",
|
|
|
+ "transform_var_name": "probe_in_femur"
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "target": "probe",
|
|
|
+ "observer": "tibia",
|
|
|
+ "transform_var_name": "probe_in_tibia"
|
|
|
+ }
|
|
|
+ ]
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "ndi_interface",
|
|
|
+ "name": "ndi",
|
|
|
+ "init_config": {
|
|
|
+ "address_type": "ethernet",
|
|
|
+ "ip": "10.0.0.5",
|
|
|
+ "tcp_port": 8765,
|
|
|
+ "com_port": "COM3",
|
|
|
+ "tool_list": [
|
|
|
+ {
|
|
|
+ "rom_path": "/home/tpx/data/roms/GlassProbe_4Ball_4.rom",
|
|
|
+ "outputs": {
|
|
|
+ "transform": "probe_in_tracker"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "rom_path": "/home/tpx/data/roms/Glass_4Ball_1.rom",
|
|
|
+ "outputs": {
|
|
|
+ "transform": "camera_ref_in_tracker"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "rom_path": "/home/tpx/data/roms/Glass_3Ball_6.rom",
|
|
|
+ "outputs": {
|
|
|
+ "transform": "femur_ref_in_tracker"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "rom_path": "/home/tpx/data/roms/Glass_3Ball_5.rom",
|
|
|
+ "outputs": {
|
|
|
+ "transform": "tibia_ref_in_tracker"
|
|
|
+ }
|
|
|
+ }
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ "start_config": {
|
|
|
+ "allow_unreliable": true,
|
|
|
+ "prefer_stream_tracking": false
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "transform_obj_validity_watcher",
|
|
|
+ "name": "probe_visibility_watcher",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "probe_in_tracker"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "transform_obj_validity_watcher",
|
|
|
+ "name": "camera_visibility_watcher",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "camera_ref_in_tracker"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "transform_obj_validity_watcher",
|
|
|
+ "name": "femur_visibility_watcher",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "femur_ref_in_tracker"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "transform_obj_validity_watcher",
|
|
|
+ "name": "tibia_visibility_watcher",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "tibia_ref_in_tracker"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "scalarxyz_transformer",
|
|
|
+ "name": "probe_tip_in_femur_ref_transformer",
|
|
|
+ "start_config": {
|
|
|
+ "transform_type": "point",
|
|
|
+ "transform_var_name": "probe_in_femur_ref",
|
|
|
+ "target_value": [
|
|
|
+ 0,
|
|
|
+ 0,
|
|
|
+ 0
|
|
|
+ ],
|
|
|
+ "output_var_name": "probe_tip_in_femur_ref"
|
|
|
+ },
|
|
|
+ "dependencies": [
|
|
|
+ "ndi",
|
|
|
+ "transform_tree"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "scalarxyz_transformer",
|
|
|
+ "name": "probe_tip_in_tibia_ref_transformer",
|
|
|
+ "start_config": {
|
|
|
+ "transform_type": "point",
|
|
|
+ "transform_var_name": "probe_in_tibia_ref",
|
|
|
+ "target_value": [
|
|
|
+ 0,
|
|
|
+ 0,
|
|
|
+ 0
|
|
|
+ ],
|
|
|
+ "output_var_name": "probe_tip_in_tibia_ref"
|
|
|
+ },
|
|
|
+ "dependencies": [
|
|
|
+ "ndi",
|
|
|
+ "transform_tree"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "transform_stabilizer",
|
|
|
+ "name": "point_picker_in_femur_ref",
|
|
|
+ "start_config": {
|
|
|
+ "stable_type": "point",
|
|
|
+ "input_var_name": "probe_tip_in_femur_ref",
|
|
|
+ "output_var_name": "picked_point_in_femur_ref",
|
|
|
+ "linear_tolerance_mm": 0.05,
|
|
|
+ "temporal_interval_s": 3
|
|
|
+ },
|
|
|
+ "dependencies": [
|
|
|
+ "probe_tip_in_femur_ref_transformer"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "transform_stabilizer",
|
|
|
+ "name": "point_picker_in_tibia_ref",
|
|
|
+ "start_config": {
|
|
|
+ "stable_type": "point",
|
|
|
+ "input_var_name": "probe_tip_in_tibia_ref",
|
|
|
+ "output_var_name": "picked_point_in_tibia_ref",
|
|
|
+ "linear_tolerance_mm": 0.05,
|
|
|
+ "temporal_interval_s": 3
|
|
|
+ },
|
|
|
+ "dependencies": [
|
|
|
+ "probe_tip_in_tibia_ref_transformer"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "scalarxyz_obj_watcher",
|
|
|
+ "name": "picked_point_watcher_for_femur_ref",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "picked_point_in_femur_ref"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "scalarxyz_obj_watcher",
|
|
|
+ "name": "picked_point_watcher_for_tibia_ref",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "picked_point_in_tibia_ref"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "landmark_registration",
|
|
|
+ "name": "femur_landmark",
|
|
|
+ "start_config": {
|
|
|
+ "fiducial_points": [
|
|
|
+ [
|
|
|
+ 1.68412,
|
|
|
+ 22.5766,
|
|
|
+ 202.831
|
|
|
+ ],
|
|
|
+ [
|
|
|
+ 13.5083,
|
|
|
+ -24.1831,
|
|
|
+ 200.386
|
|
|
+ ],
|
|
|
+ [
|
|
|
+ 26.621,
|
|
|
+ 2.0151,
|
|
|
+ 191.341
|
|
|
+ ]
|
|
|
+ ],
|
|
|
+ "point_var_name": "picked_point_in_femur_ref",
|
|
|
+ "transform_var_name": "femur_in_femur_ref",
|
|
|
+ "error_var_name": "femur_in_femur_ref_error"
|
|
|
+ },
|
|
|
+ "dependencies": [
|
|
|
+ "point_picker_in_femur_ref"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "transform_obj_watcher",
|
|
|
+ "name": "femur_registration_result_watcher",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "femur_in_femur_ref"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "double_obj_watcher",
|
|
|
+ "name": "femur_registration_error_watcher",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "femur_in_femur_ref_error"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "scalarxyz_transformer",
|
|
|
+ "name": "probe_tip_in_femur_transformer",
|
|
|
+ "start_config": {
|
|
|
+ "transform_type": "point",
|
|
|
+ "transform_var_name": "probe_in_femur",
|
|
|
+ "target_value": [
|
|
|
+ 0,
|
|
|
+ 0,
|
|
|
+ 0
|
|
|
+ ],
|
|
|
+ "output_var_name": "probe_tip_in_femur"
|
|
|
+ },
|
|
|
+ "dependencies": [
|
|
|
+ "ndi",
|
|
|
+ "transform_tree"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "transform_stabilizer",
|
|
|
+ "name": "point_picker_in_femur",
|
|
|
+ "start_config": {
|
|
|
+ "stable_type": "point",
|
|
|
+ "input_var_name": "probe_tip_in_femur",
|
|
|
+ "output_var_name": "picked_point_in_femur",
|
|
|
+ "linear_tolerance_mm": 0.05,
|
|
|
+ "temporal_interval_s": 3
|
|
|
+ },
|
|
|
+ "dependencies": [
|
|
|
+ "probe_tip_in_femur_transformer"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "scalarxyz_obj_watcher",
|
|
|
+ "name": "picked_point_watcher_for_femur",
|
|
|
+ "start_config": {
|
|
|
+ "variable_name": "picked_point_in_femur"
|
|
|
+ }
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "empty_object",
|
|
|
+ "name": "tracker_all",
|
|
|
+ "dependencies": [
|
|
|
+ "transform_tree",
|
|
|
+ "ndi",
|
|
|
+ "probe_visibility_watcher",
|
|
|
+ "camera_visibility_watcher",
|
|
|
+ "femur_visibility_watcher",
|
|
|
+ "tibia_visibility_watcher"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "empty_object",
|
|
|
+ "name": "femur_landmark_all",
|
|
|
+ "dependencies": [
|
|
|
+ "tracker_all",
|
|
|
+ "femur_landmark",
|
|
|
+ "picked_point_watcher_for_femur_ref",
|
|
|
+ "femur_registration_result_watcher",
|
|
|
+ "femur_registration_error_watcher"
|
|
|
+ ]
|
|
|
+ },
|
|
|
+ {
|
|
|
+ "type": "empty_object",
|
|
|
+ "name": "femur_icp_all",
|
|
|
+ "dependencies": [
|
|
|
+ "tracker_all",
|
|
|
+ "point_picker_in_femur",
|
|
|
+ "picked_point_watcher_for_femur"
|
|
|
+ ]
|
|
|
+ }
|
|
|
+ ]
|
|
|
+}
|